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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009130 chr22:49414658 C/T FOXRED2 chr22:36883237-36903148:- -0.62 -6.62 9.61E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T GGA1 chr22:38004482-38029571:+ -0.63 -7.33 1.02E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T GTPBP1 chr22:39101728-39134304:+ -0.57 -6.66 7.41E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T H1F0 chr22:38201100-38203443:+ -0.57 -5.98 4.4E-9 Box Plot
THCA rs6009130 chr22:49414658 C/T HDAC10 chr22:50683612-50689834:- -0.51 -6.65 8.23E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T HIC2 chr22:21771693-21805752:+ -0.48 -6.39 3.99E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T HMGXB4 chr22:35653445-35691800:+ -0.41 -6.75 4.26E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T HPS4 chr22:26839389-26879803:- -0.65 -7.02 7.48E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T HSCB chr22:29138019-29153503:+ -0.58 -7.28 1.35E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T KLHL22 chr22:20795806-20850170:- -0.73 -8.45 3.62E-16 Box Plot
THCA rs6009130 chr22:49414658 C/T L3MBTL2 chr22:41601209-41627275:+ -0.85 -8.29 1.18E-15 Box Plot
THCA rs6009130 chr22:49414658 C/T LDOC1L chr22:44888452-44894178:- -0.51 -7.6 1.58E-13 Box Plot
THCA rs6009130 chr22:49414658 C/T LMF2 chr22:50941378-50946120:- -0.63 -7.79 4.29E-14 Box Plot
THCA rs6009130 chr22:49414658 C/T LOC100271722 chr22:46435789-46440748:- -0.52 -6.26 8.76E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T LOC150381 chr22:46449726-46454400:+ -0.58 -7.14 3.41E-12 Box Plot